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Genomes supported

IUPAC CODES:

• A   Adenine
• C   Cytosine
• G   Guanine
• T   Thymine
• U   Uracil
• B = C|T|U|G = ~A
• D = A|T|U|G = ~C
• H = A|T|U|C = ~G
• K = T|U|G
• M = C|A
• N = A|C|G|T|U
• R = A|G
• S = C|G
• V = A|C|G = ~(T|U)
• W = T|U|A
• Y = C|T|U

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Downloads

We currently offer two download options.

1. The easy option: requires less than 10 minutes to set up
   You can download the newest command-line version of Fly Enhancer, Worm Enhancer, and Plant Enhancer to run on your own computer. This updated program uses Genome Enhancer 2.0 Beta to scan genomes at a rate that is about 50x faster than the web version.
   
   Genome Enhancer is in beta, with periodic new releases. The most recent version is beta 2. See change log for details.
   
   

   Fly Enhancer beta 2 downloadable files:

   ReadMe
   G4-macintosh
   G5-macintosh
   Power-macintosh
   Windows PC
   
   

   Worm Enhancer beta 2 downloadable files:

   ReadMe
   G4-macintosh
   G5-macintosh
   Power-macintosh
   Windows PC
   
   

   Plant Enhancer beta 2 downloadable files:

   ReadMe
   G4-macintosh
   G5-macintosh
   Power-macintosh
   Windows PC
   
   

   Bee Enhancer beta 2 downloadable files:

   ReadMe
   G4-macintosh
   G5-macintosh
   Power-macintosh
   Windows PC
   
   

   Beetle Enhancer beta 2 downloadable files:

   ReadMe
   G4-macintosh
   G5-macintosh
   Power-macintosh
   Windows PC
   
   

   Mosquito Enhancer beta 2 downloadable files:

   ReadMe
   G4-macintosh
   G5-macintosh
   Power-macintosh
   Windows PC
   
   

   
   
   
2. The advanced option: requires some hours to set up
   You can download the source code for the web version of fly enhancer, worm enhancer and plant enhancer, and install it on your own server.

   WEBGenomeEnhancer.tar.gz